Networks will be downloaded for selected species. MGI Vertebrate Homology was used for id conversion. The number of ids and edges are different with those MouseNet.
[+] MouseNet V2 : Full integrated network
[+] Gold Standard: Positive functional gene associations
[+] Component networks derived directly from Mus musculus data
| Network | Description | Links |
|---|
| MM-CX | Co-expression patterns of Mus musculus genes | 180,037 |
| MM-GN | Gene Neighborhood, Proximity between two mouse gene orthologs in Prokaryotic genomes | 157,769 |
| MM-PG | Phylogenetic profiling, Co-inheritance patterns of mouse ortholog genes across organisms | 231,833 |
| MM-LC | Literature curated PPI, downloaded from iRefIndex 14.0 | 11,678 |
[+] Component networks derived from networks of other organisms' (Associalogs)
| Network | (Association between Mus musculus orthologs) | Links |
|---|
| DM-CX | Co-expression links in D. melanogaster network(FlyNet) | 31,951 |
| DM-LC | Literature curated PPI of D. melanogaster(FlyNet) | 3,240 |
| HS-HT | High-throughput PPI in H. sapiens network (HumanNet) | 16,487 |
| HS-LC | Literature curated PPI in H. sapiens network (HumanNet) | 163,754 |
| SC-CC | Co-citation links in S. cerevisiae network (YeastNet) | 43,148 |
| SC-CX | Co-expression links in S. cerevisiae network (YeastNet) | 40,804 |
| SC-GT | Genetic interactions in S. cerevisiae network (YeastNet) | 12,526 |
| SC-HT | High-throughput PPI in S. cerevisiae network (YeastNet) | 41,735 |
| SC-LC | Literature curated PPI in S. cerevisiae network (YeastNet) | 25,891 |
