DB/data set | Reference (PMID) | Edge list download | #link | Experiment description
|
GSE7 | 11027315 | download | 36200 | Tryptophan metabolism response in E. coli |
GSE1106 | 15129285 | download | 30071 | aerobic knock-out |
GSE1107 | 18828895 | download | 26500 | anaerobic knock-out |
GSE1730 | 15535862 | download | 5096 | mRNA abundance from wild type |
GSE1780 | 15817786 | download | 8892 | The expression profile of Escherichia coli K-12 in response to minimal, optimal and excess copper concentrations |
GSE2999 | NA | download | 27495 | Cisplatin-induced gene expression in DNA adenine methyltransferase (dam) and mismatch repair deficient E. coli |
GSE3250 | 16141204 | download | 12037 | BW25113 glucose to acetate transition |
GSE3591 | 17921306 | download | 8972 | A reassesment of the FNR regulon and the effects of nitrate,nitrite, narXL and narQP |
GSE3905 | 17222132 | download | 7002 | Temporal Biofilm Expression of E. coli K-12 after 4, 7, 15, and 24 hr |
GSE3977 | 14981237 | download | 19197 | Comparative Transcript Abundance in E. Coli Degradosome Mutants and their Parental Strains |
GSE4363 | 16626502 | download | 19004 | Recovery from stationary phase in LB + 0.2 % glucose |
GSE4408 | 17009874 | download | 11070 | Transcriptional consequences of DNA gyrase inhibition |
GSE4511 | 15601715 | download | 12005 | pH Regulates Genes for Flagellar Motility, Catabolism, and Oxidative Stress in Escherichia coli K-12 |
GSE6033 | 20863252 | download | 15203 | Reference Design time-course |
GSE6836 | 17214507 | download | 14450 | Large-Scale Mapping and Validation of E. coli Transcriptional Regulation from a Compendium of Expression Profiles |
GSE7326 | 19304752 | download | 5241 | Expression profiles during cell death programmed by a restriction-modification system in E. coli |
GSE7398 | 17768236 | download | 12927 | Expression data from E. coli covering four phases of growth in Fis KO and WT (Fis+) strains |
GSE7477 | NA | download | 19717 | Global transcriptional response of Escherichia coli O157:H7 to growth transitions in glucose minimal medium |
GSE7573 | 17494765 | download | 13948 | Identification of NO Response Network in E. coli |
GSE7885 | 17979199 | download | 25060 | Gene expression of E. coli MG1655 wild type and rpoS knock-out strains |
GSE9923 | 18528414 | download | 17890 | Indole cell signaling occurs primarily at low temperatures in Escherichia coli |
GSE10158 | 18192383 | download | 7079 | Expression of Escherichia coli treated with cefsulodin and mecillinam, alone and in combination |
GSE10855 | 18467556 | download | 23988 | MG1655 temperature O2 response normalized data Tavazoie |
GSE11041 | 19767843 | download | 19800 | Overlapping and unique responses of E. coli to adverse conditions |
GSE11087 | 18430135 | download | 10970 | E. coli Isoleucine starvation and stringent response network |
GSE11183 | 19194530 | download | 13890 | Identification of the Escherichia coli HU regulon |
GSE12797 | 18843507 | download | 13907 | Control of RpoS in global gene expression of Escherichia coli in minimal media |
GSE12877 | 19091747 | download | 12032 | Transcriptional profiling of Escherichia coli after addition of CO-RMs to aerobically growing cells |
GSE13048 | 19091747 | download | 18914 | Transcriptional profiling of Escherichia coli |
GSE13418 | 19376922 | download | 30611 | Gene expression of E. coli MG1655 at attachment, colony formation and maturation during biofilm formation |
GSE13444 | 19536200 | download | 38923 | Identification of isobutanol response network of E. coli |
GSE13666 | 19798444 | download | 24763 | Evolution of E. coli transcriptome under osmotic-stress with and without RpoS |
GSE15405 | 20008510 | download | 90421 | Expression data from E. coli cells overexpressing GraL for long periods of time |
GSE15406 | 20008510 | download | 41684 | Expression data from E. coli cells overexpressing GraL for short and long periods of time |
GSE15409 | 19366454 | download | 14828 | Amino acid/Nucleotide perturbation in Escherichia coli |
GSE15500 | 21057108 | download | 10003 | Analysis of differences in gene expression due to small adaptive mutations in RNA polymerase B' subunit (rpoC) |
GSE16973 | 20118358 | download | 3492 | Functional Genomic Study of Exogenous n-Butanol Stress in Escherichia coli |
GSE17276 | 19893610 | download | 39945 | Transcriptional profiling of an evolved polymorphism in E. coli |
GSE17584 | 19703305 | download | 12225 | Transcriptional effects of CRP* expression in Escherichia coli |
GSE19742 | 20478253 | download | 13966 | Expression profiling of E.coli K-12 wild-type vs. delta dksA cells upon amino acid starvation |
GSE20305 | 20461071 | download | 31877 | Time resolved response of E. coli to 5 different stress conditions |
GSE21839 | 20709841 | download | 16926 | Transcriptome analysis of wild type E. coli (K-12 MG1655) comparing to mutant E. coli strain (ECOM4) under aerobic and anaerobic conditions |
GSE21869 | 21785135 | download | 15320 | Expression profiles of evolved clones isolated at various stages during adaptive experimental evolution of E. coli |
GSE26187 | 22016571 | download | 13001 | Transcriptional profiling of Escherichia coli during a transition from zinc starvation to surfeit |
GSE28412 | 22018139 | download | 7004 | Analyzing the metabolic stress response of recombinant Escherichia coli cultures expressing human interferon beta in high cell density fed batch cultures using time course transcriptomic data |
GSE28795 | 22056927 | download | 9926 | Expression data from E. coli cells overexpressing either GreA or GreB in ppGpp0 cells in the dksA+ or dksA- background |
GSE29424 | 21948837 | download | 5921 | Functional genomics study of endogenous free fatty acid overproduction in Escherichia coli |
GSE30639 | 22645336 | download | 8910 | Evolution of gene expression during long term coexistence in a bacterial evolution experiment |
GSE31333 | 16249312 | download | 29958 | NIA Neuroarray dehydration |
GSE32561 | 22038610 | download | 18815 | Investigating the impact of heterologous expression of the Micrococcus luteus FabH on global transcription in Escherichia coli |
GSE32562 | 22122981 | download | 13089 | Trimethoprim response in Escherichia coli in bacteriostatic and bactericidal conditions |
GSE33147 | 16204189 | download | 32077 | Expression data from laboratory evolution of Escherichia coli on lactate or glycerol |
GSE34023 | 22295907 | download | 21682 | Overexpression of BglJ and LeuO in Escherichia coli K12 |
GSE35049 | 22389370 | download | 41839 | Analysis of ethanologenic E.coli strain GLBRCE1 during fermentation of alkaline-pretreated corn stover hydrolysate |